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Integrated metabolomic and transcriptomic analyses of two peanut (Arachis hypogaea L.) cultivars differing in amino acid me ... 1 1 Introduction 1 2 Materials and methods 2 2.1 Plant material and sampling 2 2.2 Total free amino acid measurement 2 2.3 Sample preparation and LC-MS analysis 2 2.4 RNA extraction and RNA-seq analysis 2 2.5 Temporal analysis 3 2.6 Gene co-expression network analysis 3 2.7 qRT-PCR analysis 3 2.8 Statistical analysis 3 3 Results 3 3.1 The contents of amino acids in the mature seed of two peanut cultivars 3 3.2 Metabolomic changes during seed development 3 3.3 Transcriptomic analysis of the peanut seeds across developmental stages 5 3.4 Differential trends of genes involved in amino acid metabolism 5 3.5 Gene regulatory network correlated to the pathway of arginine biosynthesis 5 4 Discussion 6 4.1 Amino acids metabolism during seed development 6 4.2 The crucial roles of regulatory genes in the amino acid biosynthesis and metabolism pathways 10 Funding 10 Authorship contribution statement 10 Declaration of competing interest 10 Appendix A Supplementary data 10 References 10

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Language

UND

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nonfiction