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Ligand Binding Site Prediction Tools by chandan kumar is a document available to read on EtoBox.
What is Ligand Binding Site Prediction Tools about?
The document discusses using Q-SiteFinder and CASTp servers to predict ligand binding sites in proteins. Q-SiteFinder identified 10 predicted binding sites for soybean beta-amylase (PDB ID 1byb) ranked by favorable binding energy. The highest ranked site included most of the maltose sugar ligand. CASTp analysis of the same protein identified cavities and pockets, with the largest pocket matching the location and shape of the maltose ligand. Comparing the top predictions from Q-SiteFinder and CASTp sho
- Author
- chandan kumar
- Language
- EN