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What is AutoPH4: Automated Pharmacophore Modeling about?

This document describes settings and parameters used for the AutoPH4 method for automatically generating pharmacophore models from protein binding pockets. AutoPH4 can generate pharmacophore features in two ways - the "holo" option places features at cognate ligand points, while the "apo" option clusters features. Tables provide default settings for feature types like hydrogen bond donors/acceptors, aromatic, and hydrophobic regions. The document compares results of AutoPH4, Glide, GOLD, and fingerprints on

Author

AngelCo Pets

Language

EN