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What is Scale-Free Networks and Rule-Based Modeling about?

The document provides instructions for two modeling exercises using rule-based modeling in BioNetGen: 1) Model protein A which has three binding sites that proteins B, C, and D can bind to. Implement this in a .bngl file and plot the states and specified observables. 2) Model a bivalent ligand and receptor that can sequentially associate to form complexes. Implement this in a new .bngl file, and plot the states and specified observables, including free and bound species. Initial concentrations, binding r

Author

mariolabestia

Language

EN