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Computational and Statistical Methods for Protein Quantification by Mass Spectrometry by Ingvar Eidhammer; Harald Barsnes; Geir Egil Eide; Lennart Martens is a book available to read on EtoBox.
What is Computational and Statistical Methods for Protein Quantification by Mass Spectrometry about?
## Protein quantification by mass spectrometry Protein quantification consists of performing experiments to determine proteome and/or protein profiles and comparing these. Numerous methods are available, and in this chapter we try to classify them and give brief explanations of the different approaches. ### 5.1 Situations, protein, and peptide variants Before going into the details of the different approaches we first have to setup the terminology and define some of the most commonly used terms. #### 5.1.1 Situation A situation is a site, and the state of the site, for which a proteome profile is to be determined (or compared to a profile from another situation). An example of a situation is to look at the liver of cod living in polluted water, or cod living in nonpolluted water. #### 5.1.2 Protein variants -peptide variants A quantification task typically compares the abundances of proteins in different situations. To distinguish a protein in different situations/samples we term them protein variants, where a different variant is used for each situation or sample (whether the experiment concerns situations or samples depends on the circumstances).
- Author
- Ingvar Eidhammer; Harald Barsnes; Geir Egil Eide; Lennart Martens
- Publisher
- Wiley & Sons, Limited, John
- Published
- 2013
- Language
- EN
- ISBN
- 9781118493779
- Subjects
- Mathematics, Science, Medical
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