About this document
Phylomatic and Phylocom Guide by erollinson is a document available to read on EtoBox.
Phylomatic and Phylocom are programs used for community phylogenetic analysis. Phylomatic creates a phylogenetic tree containing only the species in a sample from a supertree. Phylocom performs analyses like calculating phylogenetic diversity using the tree from Phylomatic. The document outlines the steps to format data correctly for these programs, including cleaning species names, creating taxa and sample files, choosing a supertree, and running commands to make a community phylogeny and calculate metrics
- Author
- erollinson
- Language
- EN